Pseudomonas fluorescens F113, PSF113_0689 (niaP)

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_0689
Name	niaP
Replicon	chromosome
Genomic location	825553 - 826935 (+ strand)

Cross-References

RefSeq	YP_005206120.1
GI	378948632
Entrez	11828775
INSDC	AEV60725.1
NCBI Locus Tag	PSF113_0689
UniParc	UPI00023B388A
UniProtKB Acc	G8Q641
UniProtKB ID	G8Q641_PSEFL
UniRef100	UniRef100_G8Q641
UniRef50	UniRef50_A1WJL6
UniRef90	UniRef90_G8Q641

Product

Feature Type	CDS
Coding Frame	1
Product Name	protein NiaP
Synonyms
Evidence for Translation
Charge (pH 7)	3.39
Kyte-Doolittle Hydrophobicity Value	0.658
Molecular Weight (kDa)	50143.5
Isoelectric Point (pI)	8.72

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 538 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001513 (768 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_0689 Search term: niaP Search term: protein NiaP

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000377779 synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874] E-value: 1.1e-26 Percent Identity: 26.5
Ensembl 110, assembly GRCh38.p14	ENSP00000450992 synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874] E-value: 1.1e-26 Percent Identity: 26.5
Ensembl 110, assembly GRCh38.p14	ENSP00000332818 synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874] E-value: 1.1e-26 Percent Identity: 26.5

References