Pseudomonas fluorescens F113, PSF113_0689 (niaP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0689
Name
niaP
Replicon chromosome
Genomic location 825553 - 826935 (+ strand)

Cross-References

RefSeq YP_005206120.1
GI 378948632
Entrez 11828775
INSDC AEV60725.1
NCBI Locus Tag PSF113_0689
UniParc UPI00023B388A
UniProtKB Acc G8Q641
UniProtKB ID G8Q641_PSEFL
UniRef100 UniRef100_G8Q641
UniRef50 UniRef50_A1WJL6
UniRef90 UniRef90_G8Q641

Product

Feature Type CDS
Coding Frame 1
Product Name
protein NiaP
Synonyms
Evidence for Translation
Charge (pH 7) 3.39
Kyte-Doolittle Hydrophobicity Value 0.658
Molecular Weight (kDa) 50143.5
Isoelectric Point (pI) 8.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 538 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001513 (786 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0689
Search term: niaP
Search term: protein NiaP

Human Homologs

Ensembl 107, assembly GRCh38.p13
synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
E-value: 1.1e-26
Percent Identity: 26.5
Ensembl 107, assembly GRCh38.p13
synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
E-value: 1.1e-26
Percent Identity: 26.5
Ensembl 107, assembly GRCh38.p13
synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
E-value: 1.1e-26
Percent Identity: 26.5

References

No references are associated with this feature.