Pseudomonas fluorescens F113, PSF113_1068

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1068
Name
Replicon chromosome
Genomic location 1274623 - 1275822 (- strand)

Cross-References

RefSeq YP_005206492.1
GI 378949004
Entrez 11829157
INSDC AEV61097.1
NCBI Locus Tag PSF113_1068
UniParc UPI00023B475D
UniProtKB Acc G8QB42
UniProtKB ID G8QB42_PSEFL
UniRef100 UniRef100_G8QB42
UniRef50 UniRef50_A9WGE3
UniRef90 UniRef90_K9NPF5

Product

Feature Type CDS
Coding Frame 1
Product Name
L-carnitine dehydratase/bile acid-inducible protein F
Synonyms
Evidence for Translation
Charge (pH 7) -4.57
Kyte-Doolittle Hydrophobicity Value -0.067
Molecular Weight (kDa) 43.3
Isoelectric Point (pI) 5.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 311 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001950 (543 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1068

Human Homologs

Ensembl 97, assembly GRCh38.p12
succinyl-CoA:glutarate-CoA transferase [Source:HGNC Symbol;Acc:HGNC:16001]
E-value: 1.3e-54
Percent Identity: 30.6

References

No references are associated with this feature.