Pseudomonas fluorescens F113, PSF113_1200

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1200
Name
Replicon chromosome
Genomic location 1412429 - 1413298 (- strand)

Cross-References

RefSeq YP_005206624.1
GI 378949136
Entrez 11829290
INSDC AEV61229.1
NCBI Locus Tag PSF113_1200
UniParc UPI00023B4ADE
UniProtKB Acc G8QC64
UniProtKB ID G8QC64_PSEFL
UniRef100 UniRef100_G8QC64
UniRef50 UniRef50_C1DSP6
UniRef90 UniRef90_Q4KHB2

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.50
Kyte-Doolittle Hydrophobicity Value -0.167
Molecular Weight (kDa) 32026.2
Isoelectric Point (pI) 6.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 536 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002230 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1200

Human Homologs

References

No references are associated with this feature.