Pseudomonas fluorescens F113, PSF113_1208 (virJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1208
Name
virJ
Replicon chromosome
Genomic location 1420949 - 1422211 (- strand)

Cross-References

RefSeq YP_005206632.1
GI 378949144
Entrez 11829298
NCBI Locus Tag PSF113_1208

Product

Feature Type CDS
Coding Frame 1
Product Name
protein VirJ
Synonyms
Evidence for Translation
Charge (pH 7) -10.42
Kyte-Doolittle Hydrophobicity Value -0.219
Molecular Weight (kDa) 45623.5
Isoelectric Point (pI) 4.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 34 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000885 (507 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1208
Search term: virJ
Search term: protein VirJ

Human Homologs

References

No references are associated with this feature.