Pseudomonas fluorescens F113, PSF113_1212 (dinB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1212
Name
dinB
Replicon chromosome
Genomic location 1425701 - 1426762 (+ strand)

Cross-References

RefSeq YP_005206634.1
GI 378949146
EC Number 2.7.7.7
Entrez 11829302
INSDC AEV61239.1
NCBI Locus Tag PSF113_1212
UniParc UPI00023B4BE1
UniProtKB Acc G8QC74
UniProtKB ID G8QC74_PSEFL
UniRef100 UniRef100_G8QC74
UniRef50 UniRef50_Q6D1H8
UniRef90 UniRef90_E2XXJ0

Product

Feature Type CDS
Coding Frame 1
Product Name
DinB family protein
Synonyms
Evidence for Translation
Charge (pH 7) 4.75
Kyte-Doolittle Hydrophobicity Value -0.260
Molecular Weight (kDa) 39.3
Isoelectric Point (pI) 8.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 520 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000889 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1212
Search term: dinB

Human Homologs

Ensembl 110, assembly GRCh38.p14
REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060]
E-value: 3.8e-38
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060]
E-value: 3.8e-38
Percent Identity: 29.5

References

No references are associated with this feature.