Pseudomonas fluorescens F113, PSF113_1253 (livF2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1253
Name
livF2
Replicon chromosome
Genomic location 1467778 - 1468479 (- strand)

Cross-References

RefSeq YP_005206675.1
GI 378949187
EC Number 3.6.1.3
Entrez 11829343
INSDC AEV61280.1
NCBI Locus Tag PSF113_1253
UniParc UPI00023B3B8D
UniProtKB Acc G8PW96
UniProtKB ID G8PW96_PSEFL
UniRef100 UniRef100_G8PW96
UniRef50 UniRef50_Q0K8G7
UniRef90 UniRef90_G8PW96

Product

Feature Type CDS
Coding Frame 1
Product Name
LivF protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.07
Kyte-Doolittle Hydrophobicity Value -0.062
Molecular Weight (kDa) 25.6
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001032 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1253
Search term: livF2
Search term: LivF protein

Human Homologs

Ensembl 107, assembly GRCh38.p13
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value: 5.7e-19
Percent Identity: 30.9
Ensembl 107, assembly GRCh38.p13
ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
E-value: 5.7e-19
Percent Identity: 30.9

References

No references are associated with this feature.