Pseudomonas fluorescens F113, PSF113_1769 (oprF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1769
Name
oprF
Replicon chromosome
Genomic location 2059966 - 2061000 (+ strand)

Cross-References

RefSeq YP_005207188.1
GI 378949700
Entrez 11829858
INSDC AEV61793.1
NCBI Locus Tag PSF113_1769
UniParc UPI00000B3D1F
UniProtKB Acc G8Q314
UniProtKB ID G8Q314_PSEFL
UniRef100 UniRef100_Q9X4L6
UniRef50 UniRef50_P13794
UniRef90 UniRef90_P22263

Product

Feature Type CDS
Coding Frame 1
Product Name
protein OprF
Synonyms
Evidence for Translation
Charge (pH 7) -14.39
Kyte-Doolittle Hydrophobicity Value -0.481
Molecular Weight (kDa) 36589.8
Isoelectric Point (pI) 4.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 434 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003618 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1769
Search term: oprF
Search term: protein OprF

Human Homologs

References

No references are associated with this feature.