Pseudomonas fluorescens F113, PSF113_1879

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1879
Name
Replicon chromosome
Genomic location 2209262 - 2209930 (+ strand)

Cross-References

RefSeq YP_005207294.1
GI 378949806
Entrez 11829970
INSDC AEV61899.1
NCBI Locus Tag PSF113_1879
UniParc UPI00023B3CC3
UniProtKB Acc G8Q558
UniProtKB ID G8Q558_PSEFL
UniRef100 UniRef100_G8Q558
UniRef50 UniRef50_Q0C2L9
UniRef90 UniRef90_Q4K9H1

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.87
Kyte-Doolittle Hydrophobicity Value -0.270
Molecular Weight (kDa) 24.8
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002900 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1879

Human Homologs

References

No references are associated with this feature.