Pseudomonas fluorescens F113, PSF113_2181 (serS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_2181
Name
serS
Replicon chromosome
Genomic location 2556068 - 2557348 (+ strand)

Cross-References

RefSeq YP_005207587.1
GI 378950099
EC Number 6.1.1.11
Entrez 11830274
INSDC AEV62192.1
NCBI Locus Tag PSF113_2181
UniParc UPI000204114D
UniProtKB Acc G8Q8Q4
UniProtKB ID G8Q8Q4_PSEFL
UniRef100 UniRef100_A0A0D0SXC4
UniRef50 UniRef50_Q8RH11
UniRef90 UniRef90_Q3KA84

Product

Feature Type CDS
Coding Frame 1
Product Name
SerS protein
Synonyms
Evidence for Translation
Charge (pH 7) -12.17
Kyte-Doolittle Hydrophobicity Value -0.270
Molecular Weight (kDa) 47.1
Isoelectric Point (pI) 4.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 654 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002939 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_2181
Search term: serS
Search term: SerS protein

Human Homologs

Ensembl 110, assembly GRCh38.p14
seryl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:10537]
E-value: 1.1e-52
Percent Identity: 35.8

References

No references are associated with this feature.