Pseudomonas fluorescens F113, PSF113_2660 (vdh)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
| Locus Tag |
PSF113_2660
|
| Name |
vdh
|
| Replicon | chromosome |
| Genomic location | 3127385 - 3128833 (+ strand) |
Cross-References
| RefSeq | YP_005208059.1 |
| GI | 378950571 |
| EC Number | 1.2.1.67 |
| Entrez | 11830753 |
| NCBI Locus Tag | PSF113_2660 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
protein Vdh
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.30 |
| Kyte-Doolittle Hydrophobicity Value | 0.202 |
| Molecular Weight (kDa) | 50445.1 |
| Isoelectric Point (pI) | 5.29 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 596 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG018120 (71 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_2660
Search term: vdh
Search term: protein Vdh
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
aldehyde dehydrogenase 1 family member A3 [Source:HGNC Symbol;Acc:HGNC:409]
E-value:
3.4e-66
Percent Identity:
34.7
|
References
No references are associated with this feature.