Pseudomonas fluorescens F113, PSF113_2878

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_2878
Name
Replicon chromosome
Genomic location 3388807 - 3389919 (+ strand)

Cross-References

RefSeq YP_005208277.1
GI 378950789
Entrez 11830973
INSDC AEV62882.1
NCBI Locus Tag PSF113_2878
UniParc UPI00023B4C4F
UniProtKB Acc G8Q1Z3
UniProtKB ID G8Q1Z3_PSEFL
UniRef100 UniRef100_G8Q1Z3
UniRef50 UniRef50_F7ZAZ2
UniRef90 UniRef90_G8Q1Z3

Product

Feature Type CDS
Coding Frame 1
Product Name
acetylpolyamine aminohydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -9.09
Kyte-Doolittle Hydrophobicity Value 0.044
Molecular Weight (kDa) 39543.6
Isoelectric Point (pI) 6.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 444 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001890 (353 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_2878

Human Homologs

Ensembl 110, assembly GRCh38.p14
histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
E-value: 3.6e-31
Percent Identity: 33.8

References

No references are associated with this feature.