Pseudomonas fluorescens F113, PSF113_3025

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3025
Name
Replicon chromosome
Genomic location 3576770 - 3577930 (- strand)

Cross-References

RefSeq YP_005208424.1
GI 378950936
Entrez 11831120
INSDC AEV63029.1
NCBI Locus Tag PSF113_3025
UniParc UPI00023B3F03
UniProtKB Acc G8Q476
UniProtKB ID G8Q476_PSEFL
UniRef100 UniRef100_G8Q476
UniRef50 UniRef50_A0A0A1HXG1
UniRef90 UniRef90_F2KH58

Product

Feature Type CDS
Coding Frame 1
Product Name
long-chain-fatty-acid--CoA ligase
Synonyms
Evidence for Translation
Charge (pH 7) 2.69
Kyte-Doolittle Hydrophobicity Value -0.189
Molecular Weight (kDa) 42915.4
Isoelectric Point (pI) 8.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 93 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015912 (31 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3025

Human Homologs

References

No references are associated with this feature.