Pseudomonas fluorescens F113, PSF113_3045

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3045
Name
Replicon chromosome
Genomic location 3596248 - 3596946 (- strand)

Cross-References

RefSeq YP_005208442.1
GI 378950954
Entrez 11831139
INSDC AEV63047.1
NCBI Locus Tag PSF113_3045
UniParc UPI00023B4031
UniProtKB Acc G8Q494
UniProtKB ID G8Q494_PSEFL
UniRef100 UniRef100_G8Q494
UniRef50 UniRef50_G8Q494
UniRef90 UniRef90_G8Q494

Product

Feature Type CDS
Coding Frame 1
Product Name
porin, opacity type
Synonyms
Evidence for Translation
Charge (pH 7) -9.29
Kyte-Doolittle Hydrophobicity Value -0.256
Molecular Weight (kDa) 25523.4
Isoelectric Point (pI) 4.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 45 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG028985 (17 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3045

Human Homologs

References

No references are associated with this feature.