Pseudomonas fluorescens F113, PSF113_3056 (hlyD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3056
Name
hlyD
Replicon chromosome
Genomic location 3611421 - 3611696 (+ strand)

Cross-References

RefSeq YP_005208453.1
GI 378950965
Entrez 11831150
INSDC AEV63058.1
NCBI Locus Tag PSF113_3056
UniParc UPI00023B403A
UniProtKB Acc G8Q4A5
UniProtKB ID G8Q4A5_PSEFL
UniRef100 UniRef100_G8Q4A5
UniRef50 UniRef50_G8Q4A5
UniRef90 UniRef90_G8Q4A5

Product

Feature Type CDS
Coding Frame 1
Product Name
HlyD family membrane fusion protein
Synonyms
Evidence for Translation
Charge (pH 7) 4.22
Kyte-Doolittle Hydrophobicity Value 0.412
Molecular Weight (kDa) 9648.4
Isoelectric Point (pI) 10.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 71 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG030663 (1 members)
Putative Inparalogs 1 predicted inparalogs
HlyD family secretion protein (PSF113_2735) 62.5% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3056
Search term: hlyD

Human Homologs

References

No references are associated with this feature.