Pseudomonas fluorescens F113, PSF113_3208 (dhcB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3208
Name
dhcB
Replicon chromosome
Genomic location 3778798 - 3779463 (- strand)

Cross-References

RefSeq YP_005208602.1
GI 378951114
EC Number 2.8.3.5
EC Number 2.8.3.6
Entrez 11831300
INSDC AEV63207.1
NCBI Locus Tag PSF113_3208
UniParc UPI0002040C6C
UniProtKB Acc G8Q6H8
UniProtKB ID G8Q6H8_PSEFL
UniRef100 UniRef100_A0A0D0S758
UniRef50 UniRef50_Q4KEA4
UniRef90 UniRef90_Q4KEA4

Product

Feature Type CDS
Coding Frame 1
Product Name
protein DhcB
Synonyms
Evidence for Translation
Charge (pH 7) -9.34
Kyte-Doolittle Hydrophobicity Value 0.215
Molecular Weight (kDa) 23.4
Isoelectric Point (pI) 4.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 273 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003435 (545 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3208
Search term: dhcB
Search term: protein DhcB

Human Homologs

Ensembl 107, assembly GRCh38.p13
3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527]
E-value: 5.5e-56
Percent Identity: 50.5
Ensembl 107, assembly GRCh38.p13
3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527]
E-value: 5.5e-56
Percent Identity: 50.5

References

No references are associated with this feature.