Pseudomonas fluorescens F113, PSF113_3987 (foaB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
| Locus Tag |
PSF113_3987
|
| Name |
foaB
|
| Replicon | chromosome |
| Genomic location | 4692388 - 4693539 (- strand) |
Cross-References
| RefSeq | YP_005209379.1 |
| GI | 378951891 |
| EC Number | 2.3.1.16 |
| Entrez | 11832083 |
| NCBI Locus Tag | PSF113_3987 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
protein FoaB
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.02 |
| Kyte-Doolittle Hydrophobicity Value | -0.012 |
| Molecular Weight (kDa) | 40753.8 |
| Isoelectric Point (pI) | 7.00 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 1WDM | LYASE,OXIDOREDUCTASE/TRANSFERASE | 05/17/04 | fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native3) | Pseudomonas fragi | 3.8 | X-RAY DIFFRACTION | 95.3 |
| 1WDK | LYASE,OXIDOREDUCTASE/TRANSFERASE | 05/17/04 | fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native2) | Pseudomonas fragi | 2.5 | X-RAY DIFFRACTION | 95.3 |
| 1WDL | LYASE,OXIDOREDUCTASE/TRANSFERASE | 05/17/04 | fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form II (native4) | Pseudomonas fragi | 3.5 | X-RAY DIFFRACTION | 95.3 |
| 2D3T | LYASE, OXIDOREDUCTASE/TRANSFERASE | 10/01/05 | Fatty Acid beta-oxidation multienzyme complex from Pseudomonas Fragi, Form V | Pseudomonas fragi | 3.4 | X-RAY DIFFRACTION | 95.3 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 485 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002569 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_3987
Search term: foaB
Search term: protein FoaB
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
acetyl-CoA acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:82]
E-value:
2.8e-63
Percent Identity:
39.4
|
References
No references are associated with this feature.