Pseudomonas fluorescens F113, PSF113_4852

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4852
Name
Replicon chromosome
Genomic location 5640258 - 5641649 (- strand)

Cross-References

RefSeq YP_005210236.1
GI 378952748
Entrez 11832956
INSDC AEV64841.1
NCBI Locus Tag PSF113_4852
UniParc UPI00023B42D7
UniProtKB Acc G8QB01
UniProtKB ID G8QB01_PSEFL
UniRef100 UniRef100_G8QB01
UniRef50 UniRef50_A0A0A1HX97
UniRef90 UniRef90_A0A0A1HX97

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator, GntR family domain / Aspartate aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -0.49
Kyte-Doolittle Hydrophobicity Value -0.086
Molecular Weight (kDa) 51204.2
Isoelectric Point (pI) 6.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 593 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015107 (104 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4852

Human Homologs

References

No references are associated with this feature.