Pseudomonas fluorescens F113, PSF113_5167 (lrgA)

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_5167
Name	lrgA
Replicon	chromosome
Genomic location	5984183 - 5984548 (- strand)

Cross-References

RefSeq	YP_005210542.1
GI	378953054
Entrez	11833274
INSDC	AEV65147.1
NCBI Locus Tag	PSF113_5167
UniParc	UPI00023B4CE2
UniProtKB Acc	G8PY07
UniProtKB ID	G8PY07_PSEFL
UniRef100	UniRef100_G8PY07
UniRef50	UniRef50_C1DMP5
UniRef90	UniRef90_G8PY07

Product

Feature Type	CDS
Coding Frame	1
Product Name	LrgA protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.46
Kyte-Doolittle Hydrophobicity Value	1.156
Molecular Weight (kDa)	12.9
Isoelectric Point (pI)	9.07

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 68 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001669 (529 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_5167 Search term: lrgA Search term: LrgA protein

Human Homologs

References