Pseudomonas fluorescens F113, PSF113_5378

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5378
Name
Replicon chromosome
Genomic location 6219867 - 6220328 (+ strand)

Cross-References

RefSeq YP_005210744.1
GI 378953256
Entrez 11833493
INSDC AEV65349.1
NCBI Locus Tag PSF113_5378
UniParc UPI00023B40B6
UniProtKB Acc G8Q1B0
UniProtKB ID G8Q1B0_PSEFL
UniRef100 UniRef100_G8Q1B0
UniRef50 UniRef50_Q48CU1
UniRef90 UniRef90_Q48CU1

Product

Feature Type CDS
Coding Frame 1
Product Name
asnC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.96
Kyte-Doolittle Hydrophobicity Value -0.125
Molecular Weight (kDa) 16803.2
Isoelectric Point (pI) 9.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 414 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015102 (185 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5378

Human Homologs

References

No references are associated with this feature.