Pseudomonas fluorescens F113, PSF113_5389

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5389
Name
Replicon chromosome
Genomic location 6231948 - 6232106 (- strand)

Cross-References

RefSeq YP_005210756.1
GI 378953268
Entrez 11833506
INSDC AEV65361.1
NCBI Locus Tag PSF113_5389
UniParc UPI000000EAE5
UniProtKB Acc G8Q1C2
UniProtKB ID G8Q1C2_PSEFL
UniRef100 UniRef100_A0A0D0RAZ8
UniRef50 UniRef50_Q4HXT6
UniRef90 UniRef90_A0A0D0RAZ8

Product

Feature Type CDS
Coding Frame 1
Product Name
Stress induced hydrophobic peptide
Synonyms
Evidence for Translation
Charge (pH 7) 2.22
Kyte-Doolittle Hydrophobicity Value 1.506
Molecular Weight (kDa) 5.8
Isoelectric Point (pI) 10.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 96 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000550 (505 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5389

Human Homologs

References

No references are associated with this feature.