Pseudomonas fluorescens F113, PSF113_5780 (oxyR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
| Locus Tag |
PSF113_5780
|
| Name |
oxyR
|
| Replicon | chromosome |
| Genomic location | 6656631 - 6657551 (+ strand) |
Cross-References
| RefSeq | YP_005211149.1 |
| GI | 378953661 |
| Entrez | 11833902 |
| INSDC | AEV65754.1 |
| NCBI Locus Tag | PSF113_5780 |
| UniParc | UPI0002040A90 |
| UniProtKB Acc | G8Q6Z8 |
| UniProtKB ID | G8Q6Z8_PSEFL |
| UniRef100 | UniRef100_A0A0D0RGS6 |
| UniRef50 | UniRef50_Q4K3Q5 |
| UniRef90 | UniRef90_Q4K3Q5 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
protein OxyR
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.76 |
| Kyte-Doolittle Hydrophobicity Value | 0.033 |
| Molecular Weight (kDa) | 33.6 |
| Isoelectric Point (pI) | 7.40 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4X6G | DNA BINDING PROTEIN | 12/08/14 | Full-length OxyR C199D from pseudomonas aeruginosa | Pseudomonas aeruginosa PAO1 | 2 | X-RAY DIFFRACTION | 90.4 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 536 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004912 (552 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_5780
Search term: oxyR
Search term: protein OxyR
|
Human Homologs
References
No references are associated with this feature.