Pseudomonas fluorescens F113, PSF113_5786 (tagR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
| Locus Tag |
PSF113_5786
|
| Name |
tagR
|
| Replicon | chromosome |
| Genomic location | 6664265 - 6665992 (- strand) |
Cross-References
| RefSeq | YP_005211155.1 |
| GI | 378953667 |
| Entrez | 11833908 |
| INSDC | AEV65760.1 |
| NCBI Locus Tag | PSF113_5786 |
| UniParc | UPI00023B3B81 |
| UniProtKB Acc | G8Q704 |
| UniProtKB ID | G8Q704_PSEFL |
| UniRef100 | UniRef100_G8Q704 |
| UniRef50 | UniRef50_Q4K3Q0 |
| UniRef90 | UniRef90_G8Q704 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
protein TagR
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.31 |
| Kyte-Doolittle Hydrophobicity Value | -0.294 |
| Molecular Weight (kDa) | 62867.6 |
| Isoelectric Point (pI) | 5.50 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 73 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000070 (427 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_5786
Search term: tagR
Search term: protein TagR
|
Human Homologs
References
No references are associated with this feature.