Pseudomonas fluorescens F113, PSF113_5788 (tagT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5788
Name
tagT
Replicon chromosome
Genomic location 6667181 - 6667897 (- strand)

Cross-References

RefSeq YP_005211157.1
GI 378953669
EC Number 3.6.1.3
Entrez 11833910
INSDC AEV65762.1
NCBI Locus Tag PSF113_5788
UniParc UPI00023B3B83
UniProtKB Acc G8Q706
UniProtKB ID G8Q706_PSEFL
UniRef100 UniRef100_G8Q706
UniRef50 UniRef50_G8Q706
UniRef90 UniRef90_G8Q706

Product

Feature Type CDS
Coding Frame 1
Product Name
protein TagT
Synonyms
Evidence for Translation
Charge (pH 7) 6.01
Kyte-Doolittle Hydrophobicity Value 0.028
Molecular Weight (kDa) 25372.0
Isoelectric Point (pI) 8.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000072 (425 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5788
Search term: tagT
Search term: protein TagT

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 1.8e-11
Percent Identity: 29.1
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 1.8e-11
Percent Identity: 29.1
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 1.8e-11
Percent Identity: 29.1

References

No references are associated with this feature.