Pseudomonas fluorescens F113, PSF113_5798 (impB2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5798
Name
impB2
Replicon chromosome
Genomic location 6682171 - 6682677 (+ strand)

Cross-References

RefSeq YP_005211167.1
GI 378953679
Entrez 11833920
INSDC AEV65772.1
NCBI Locus Tag PSF113_5798
UniParc UPI0002040BDB
UniProtKB Acc G8Q716
UniProtKB ID G8Q716_PSEFL
UniRef100 UniRef100_A0A0D0T1G1
UniRef50 UniRef50_Q4K3N8
UniRef90 UniRef90_Q4K3N8

Product

Feature Type CDS
Coding Frame 1
Product Name
protein ImpB
Synonyms
Evidence for Translation
Charge (pH 7) -2.76
Kyte-Doolittle Hydrophobicity Value -0.223
Molecular Weight (kDa) 18.5
Isoelectric Point (pI) 5.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4UQZ PROTEIN TRANSPORT 06/25/14 Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes PSEUDOMONAS AERUGINOSA PAO1 1.599 X-RAY DIFFRACTION 93.9
5N8N STRUCTURAL PROTEIN 02/23/17 Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 PSEUDOMONAS AERUGINOSA 3.28 ELECTRON MICROSCOPY 95.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 107 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000082 (1260 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5798
Search term: impB2
Search term: protein ImpB

Human Homologs

References

No references are associated with this feature.