Pseudomonas fluorescens F113, PSF113_5799 (impC2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5799
Name
impC2
Replicon chromosome
Genomic location 6682674 - 6684176 (+ strand)

Cross-References

RefSeq YP_005211168.1
GI 378953680
Entrez 11833921
INSDC AEV65773.1
NCBI Locus Tag PSF113_5799
UniParc UPI00023B3C75
UniProtKB Acc G8Q717
UniProtKB ID G8Q717_PSEFL
UniRef100 UniRef100_G8Q717
UniRef50 UniRef50_Q4K3N7
UniRef90 UniRef90_Q4K3N7

Product

Feature Type CDS
Coding Frame 1
Product Name
protein ImpC
Synonyms
Evidence for Translation
Charge (pH 7) -13.27
Kyte-Doolittle Hydrophobicity Value -0.426
Molecular Weight (kDa) 55869.4
Isoelectric Point (pI) 5.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5N8N STRUCTURAL PROTEIN 02/23/17 Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 PSEUDOMONAS AERUGINOSA 3.28 ELECTRON MICROSCOPY 93.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 111 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000083 (1261 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5799
Search term: impC2
Search term: protein ImpC

Human Homologs

References

No references are associated with this feature.