Pseudomonas fluorescens F113, PSF113_5854
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
| Locus Tag |
PSF113_5854
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 6763743 - 6766616 (- strand) |
Cross-References
| RefSeq | YP_005211223.1 |
| GI | 378953735 |
| EC Number | 4.6.1.2 |
| Entrez | 11833976 |
| NCBI Locus Tag | PSF113_5854 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
diguanylate cyclase phosphodiesterase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.04 |
| Kyte-Doolittle Hydrophobicity Value | -0.043 |
| Molecular Weight (kDa) | 107235.3 |
| Isoelectric Point (pI) | 7.19 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 515 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004258 (1005 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_5854
Search term: diguanylate cyclase phosphodiesterase
|
Human Homologs
References
No references are associated with this feature.