Pseudomonas fluorescens F113, PSF113_5854

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5854
Name
Replicon chromosome
Genomic location 6763743 - 6766616 (- strand)

Cross-References

RefSeq YP_005211223.1
GI 378953735
EC Number 4.6.1.2
Entrez 11833976
NCBI Locus Tag PSF113_5854

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) 2.04
Kyte-Doolittle Hydrophobicity Value -0.043
Molecular Weight (kDa) 107235.3
Isoelectric Point (pI) 7.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 515 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004258 (973 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5854

Human Homologs

References

No references are associated with this feature.