Pseudomonas fluorescens F113, PSF113_5885 (rmd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5885
Name
rmd
Replicon chromosome
Genomic location 6803081 - 6803995 (+ strand)

Cross-References

RefSeq YP_005211254.1
GI 378953766
Entrez 11834007
NCBI Locus Tag PSF113_5885

Product

Feature Type CDS
Coding Frame 1
Product Name
protein Rmd
Synonyms
Evidence for Translation
Charge (pH 7) 3.14
Kyte-Doolittle Hydrophobicity Value -0.186
Molecular Weight (kDa) 33667.2
Isoelectric Point (pI) 8.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005000 (390 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5885
Search term: rmd
Search term: protein Rmd

Human Homologs

Ensembl 97, assembly GRCh38.p12
UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]
E-value: 2.6e-12
Percent Identity: 23.6
Ensembl 97, assembly GRCh38.p12
UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]
E-value: 2.6e-12
Percent Identity: 23.6

References

No references are associated with this feature.