Pseudomonas fluorescens SBW25, PFLU0036 (trpB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0036
Name
trpB
Replicon chromosome
Genomic location 38672 - 39898 (- strand)

Cross-References

RefSeq YP_002869733.1
GI 229587614
EC Number 4.2.1.20
Entrez 7816362

Product

Feature Type CDS
Coding Frame 1
Product Name
tryptophan synthase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -10.32
Kyte-Doolittle Hydrophobicity Value -0.190
Molecular Weight (kDa) 44.4
Isoelectric Point (pI) 5.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 612 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000036 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0036
Search term: trpB

Human Homologs

References

No references are associated with this feature.