Pseudomonas fluorescens SBW25, PFLU0462 (rfaF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0462
Name
rfaF
Replicon chromosome
Genomic location 523243 - 524277 (+ strand)

Cross-References

RefSeq YP_002870138.1
GI 229588019
Entrez 7820636
INSDC CAY46738.1
UniParc UPI00019D9B12
UniProtKB Acc C3KCP6
UniProtKB ID C3KCP6_PSEFS
UniRef100 UniRef100_C3KCP6
UniRef50 UniRef50_H3RIE0
UniRef90 UniRef90_Q4KJC8

Product

Feature Type CDS
Coding Frame 1
Product Name
ADP-heptose--LPS heptosyltransferase II
Synonyms
Evidence for Translation
Charge (pH 7) 3.96
Kyte-Doolittle Hydrophobicity Value -0.119
Molecular Weight (kDa) 38263.9
Isoelectric Point (pI) 8.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 314 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0462
Search term: rfaF

Human Homologs

References

No references are associated with this feature.