Pseudomonas fluorescens SBW25, PFLU0463 (rfaC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25 - Assembly GCF_000009225.2
GCF_000009225.2|latest
Locus Tag
PFLU0463
Name
rfaC
Replicon chromosome
Genomic location 524279 - 525340 (+ strand)

Cross-References

RefSeq YP_002870139.1
GI 229588020
Entrez 7820313
INSDC CAY46739.1
UniParc UPI00019D9B13
UniProtKB Acc C3KCP7
UniProtKB ID C3KCP7_PSEFS
UniRef100 UniRef100_C3KCP7
UniRef50 UniRef50_P24173
UniRef90 UniRef90_C3KCP7

Product

Feature Type CDS
Coding Frame 1
Product Name
lipopolysaccharide heptosyltransferase-1
Synonyms
Evidence for Translation
Charge (pH 7) 16.25
Kyte-Doolittle Hydrophobicity Value -0.133
Molecular Weight (kDa) 39260.1
Isoelectric Point (pI) 10.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 271 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004618 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0463
Search term: rfaC

Human Homologs

References

No references are associated with this feature.