Pseudomonas fluorescens SBW25, PFLU0483

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0483
Name
Replicon chromosome
Genomic location 548779 - 549705 (+ strand)

Cross-References

RefSeq YP_002870158.1
GI 229588039
Entrez 7816462
INSDC CAY46759.1
UniParc UPI00019D9ABA
UniProtKB Acc C3KDB9
UniProtKB ID C3KDB9_PSEFS
UniRef100 UniRef100_C3KDB9
UniRef50 UniRef50_K9NPM9
UniRef90 UniRef90_E2XKB6

Product

Feature Type CDS
Coding Frame 1
Product Name
putative lipopolysaccharide biosynthesis-related epimerase/dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -4.35
Kyte-Doolittle Hydrophobicity Value -0.017
Molecular Weight (kDa) 33.0
Isoelectric Point (pI) 5.90

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001617 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0483

Human Homologs

Ensembl 97, assembly GRCh38.p12
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 9.8e-31
Percent Identity: 31.2
Ensembl 97, assembly GRCh38.p12
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 9.8e-31
Percent Identity: 31.2

References

No references are associated with this feature.