Pseudomonas fluorescens SBW25, PFLU2109 (codA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU2109
Name
codA
Replicon chromosome
Genomic location 2290050 - 2291285 (- strand)

Cross-References

RefSeq YP_002871726.1
GI 229589607
EC Number 3.5.4.1
Entrez 7821669
INSDC CAY48349.1
UniParc UPI00019D9E33
UniProtKB Acc C3K678
UniProtKB ID C3K678_PSEFS
UniRef100 UniRef100_C3K678
UniRef50 UniRef50_G8Q551
UniRef90 UniRef90_G8Q551

Product

Feature Type CDS
Coding Frame 1
Product Name
cytosine deaminase
Synonyms
Evidence for Translation
Charge (pH 7) -7.63
Kyte-Doolittle Hydrophobicity Value -0.229
Molecular Weight (kDa) 45442.2
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 187 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000428 (479 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU2109
Search term: codA

Human Homologs

References

No references are associated with this feature.