Pseudomonas fluorescens SBW25, PFLU2340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU2340
Name
Replicon chromosome
Genomic location 2550346 - 2551500 (- strand)

Cross-References

RefSeq YP_002871945.1
GI 229589826
Entrez 7817073

Product

Feature Type CDS
Coding Frame 1
Product Name
putative polyamine ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.35
Kyte-Doolittle Hydrophobicity Value -0.063
Molecular Weight (kDa) 41753.4
Isoelectric Point (pI) 7.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016522 (125 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU2340

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
E-value: 1.1e-19
Percent Identity: 33.3

References

No references are associated with this feature.