Pseudomonas fluorescens SBW25, PFLU3171

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU3171
Name
Replicon chromosome
Genomic location 3463270 - 3464013 (- strand)

Cross-References

RefSeq YP_002872745.1
GI 229590626
Entrez 7819631
INSDC CAY49398.1
UniParc UPI00019DA569
UniProtKB Acc C3KBR2
UniProtKB ID C3KBR2_PSEFS
UniRef100 UniRef100_C3KBR2
UniRef50 UniRef50_C3KBR2
UniRef90 UniRef90_C3KBR2

Product

Feature Type CDS
Coding Frame 1
Product Name
putative short-chain dehydrogenase/oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) -2.28
Kyte-Doolittle Hydrophobicity Value -0.022
Molecular Weight (kDa) 26.3
Isoelectric Point (pI) 5.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001788 (870 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU3171

Human Homologs

Ensembl 110, assembly GRCh38.p14
3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]
E-value: 2.5e-20
Percent Identity: 35.9

References

No references are associated with this feature.