Pseudomonas fluorescens SBW25, PFLU3179A

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU3179A
Name
Replicon chromosome
Genomic location 3470600 - 3471475 (+ strand)

Cross-References

RefSeq YP_002872753.1
GI 229590634
Entrez 7819640
INSDC CAY49407.1
UniParc UPI00019DA571
UniProtKB Acc C3KBS0
UniProtKB ID C3KBS0_PSEFS
UniRef100 UniRef100_C3KBS0
UniRef50 UniRef50_Q2KUF6
UniRef90 UniRef90_C3KBS0

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.87
Kyte-Doolittle Hydrophobicity Value -0.083
Molecular Weight (kDa) 32.4
Isoelectric Point (pI) 7.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 521 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000789 (459 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU3179A

Human Homologs

References

No references are associated with this feature.