Pseudomonas fluorescens SBW25, PFLU3729

Gene Feature Overview

Strain	Pseudomonas fluorescens SBW25 GCF_000009225.2|latest
Locus Tag	PFLU3729
Name
Replicon	chromosome
Genomic location	4127420 - 4128184 (+ strand)

Cross-References

RefSeq	YP_002873284.1
GI	229591165
Entrez	7822370
INSDC	CAY50002.1
UniParc	UPI00019DA51D
UniProtKB Acc	C3JXV4
UniProtKB ID	C3JXV4_PSEFS
UniRef100	UniRef100_C3JXV4
UniRef50	UniRef50_I3X3J1
UniRef90	UniRef90_E2XTQ3

Product

Feature Type	CDS
Coding Frame	1
Product Name	short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.71
Kyte-Doolittle Hydrophobicity Value	0.344
Molecular Weight (kDa)	26.3
Isoelectric Point (pI)	4.80

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017836 (20 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFLU3729 Search term: short chain dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000265322 peroxisomal trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:18281] E-value: 5.5e-23 Percent Identity: 33.2
Ensembl 110, assembly GRCh38.p14	ENSP00000296424 3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389] E-value: 5.5e-23 Percent Identity: 31.6

References