Pseudomonas fluorescens SBW25, PFLU3729

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU3729
Name
Replicon chromosome
Genomic location 4127420 - 4128184 (+ strand)

Cross-References

RefSeq YP_002873284.1
GI 229591165
Entrez 7822370
INSDC CAY50002.1
UniParc UPI00019DA51D
UniProtKB Acc C3JXV4
UniProtKB ID C3JXV4_PSEFS
UniRef100 UniRef100_C3JXV4
UniRef50 UniRef50_I3X3J1
UniRef90 UniRef90_E2XTQ3

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -4.71
Kyte-Doolittle Hydrophobicity Value 0.344
Molecular Weight (kDa) 26.3
Isoelectric Point (pI) 4.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017836 (21 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU3729

Human Homologs

Ensembl 97, assembly GRCh38.p12
3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]
E-value: 4.7e-23
Percent Identity: 31.6
Ensembl 97, assembly GRCh38.p12
peroxisomal trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:18281]
E-value: 4.7e-23
Percent Identity: 33.2

References

No references are associated with this feature.