Pseudomonas fluorescens SBW25, PFLU3944

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU3944
Name
Replicon chromosome
Genomic location 4356122 - 4357396 (+ strand)

Cross-References

RefSeq YP_002873496.1
GI 229591377
Entrez 7818983
INSDC CAY50336.1
UniParc UPI00019DA851
UniProtKB Acc C3JYL5
UniProtKB ID C3JYL5_PSEFS
UniRef100 UniRef100_C3JYL5
UniRef50 UniRef50_G8QBC2
UniRef90 UniRef90_G8QBC2

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydropyrimidine dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -12.86
Kyte-Doolittle Hydrophobicity Value -0.024
Molecular Weight (kDa) 46.1
Isoelectric Point (pI) 4.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 385 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000430 (922 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU3944

Human Homologs

Ensembl 110, assembly GRCh38.p14
dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
E-value: 3.5e-06
Percent Identity: 31.1

References

No references are associated with this feature.