Pseudomonas fluorescens SBW25, PFLU4282

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU4282
Name
Replicon chromosome
Genomic location 4727224 - 4728021 (- strand)

Cross-References

RefSeq YP_002873826.1
GI 229591707
Entrez 7818571
INSDC CAY50856.1
UniParc UPI00019DAD51
UniProtKB Acc C3K035
UniProtKB ID C3K035_PSEFS
UniRef100 UniRef100_C3K035
UniRef50 UniRef50_E2XVL3
UniRef90 UniRef90_C3K035

Product

Feature Type CDS
Coding Frame 1
Product Name
putative endonuclease
Synonyms
Evidence for Translation
Charge (pH 7) 11.64
Kyte-Doolittle Hydrophobicity Value -0.299
Molecular Weight (kDa) 29.0
Isoelectric Point (pI) 10.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 113 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG022559 (30 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU4282

Human Homologs

Ensembl 110, assembly GRCh38.p14
exo/endonuclease G [Source:HGNC Symbol;Acc:HGNC:3347]
E-value: 5.8e-15
Percent Identity: 32.1

References

No references are associated with this feature.