Pseudomonas fluorescens SBW25, PFLU4613

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU4613
Name
Replicon chromosome
Genomic location 5088656 - 5089246 (- strand)

Cross-References

RefSeq YP_002874135.1
GI 229592016
Entrez 7818101
INSDC CAY51365.1
UniParc UPI00019DA982
UniProtKB Acc C3K0T2
UniProtKB ID C3K0T2_PSEFS
UniRef100 UniRef100_E2XWI1
UniRef50 UniRef50_A4VL64
UniRef90 UniRef90_I2BLX6

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor SigX
Synonyms
Evidence for Translation
Charge (pH 7) -0.37
Kyte-Doolittle Hydrophobicity Value -0.678
Molecular Weight (kDa) 23.2
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 470 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU4613

Human Homologs

References

No references are associated with this feature.