Pseudomonas fluorescens SBW25, PFLU4685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU4685
Name
Replicon chromosome
Genomic location 5164396 - 5165187 (- strand)

Cross-References

RefSeq YP_002874206.1
GI 229592087
Entrez 7822222
INSDC CAY51482.1
UniParc UPI00019DAAA3
UniProtKB Acc C3K0L4
UniProtKB ID C3K0L4_PSEFS
UniRef100 UniRef100_C3K0L4
UniRef50 UniRef50_G8Q168
UniRef90 UniRef90_E2XWQ1

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -6.50
Kyte-Doolittle Hydrophobicity Value -0.008
Molecular Weight (kDa) 28968.9
Isoelectric Point (pI) 5.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015519 (10 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU4685

Human Homologs

Ensembl 110, assembly GRCh38.p14
3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]
E-value: 8.2e-30
Percent Identity: 30.4

References

No references are associated with this feature.