Pseudomonas fluorescens SBW25, PFLU5629

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5629
Name
Replicon chromosome
Genomic location 6168801 - 6171230 (+ strand)

Cross-References

RefSeq YP_002875123.1
GI 229593004
Entrez 7817169
INSDC CAY52932.1
UniParc UPI00019DAE6A
UniProtKB Acc C3K377
UniProtKB ID C3K377_PSEFS
UniRef100 UniRef100_C3K377
UniRef50 UniRef50_Q9I648
UniRef90 UniRef90_I2BS76

Product

Feature Type CDS
Coding Frame 1
Product Name
putative TonB-dependent membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) -13.64
Kyte-Doolittle Hydrophobicity Value -0.426
Molecular Weight (kDa) 88469.3
Isoelectric Point (pI) 5.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 283 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000149 (2669 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5629

Human Homologs

References

No references are associated with this feature.