Pseudomonas fluorescens SBW25, PFLU5691 (dbpA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SBW25
GCF_000009225.2|latest |
| Locus Tag |
PFLU5691
|
| Name |
dbpA
|
| Replicon | chromosome |
| Genomic location | 6240137 - 6241522 (+ strand) |
Cross-References
| RefSeq | YP_002875184.1 |
| GI | 229593065 |
| Entrez | 7817215 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent RNA helicase DbpA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 4.24 |
| Kyte-Doolittle Hydrophobicity Value | -0.022 |
| Molecular Weight (kDa) | 50.0 |
| Isoelectric Point (pI) | 8.15 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 609 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000446 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU5691
Search term: dbpA
Search term: ATP-dependent RNA helicase DbpA
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
5.1e-59
Percent Identity:
40.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
5.1e-59
Percent Identity:
40.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
5.1e-59
Percent Identity:
40.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
5.1e-59
Percent Identity:
40.4
|
References
No references are associated with this feature.