Pseudomonas fluorescens SBW25, PFLU5989
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SBW25 - Assembly GCF_000009225.2
GCF_000009225.2|latest |
| Locus Tag |
PFLU5989
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 6545524 - 6546303 (+ strand) |
Cross-References
| RefSeq | YP_002875473.1 |
| GI | 229593354 |
| Entrez | 7819071 |
| INSDC | CAY53517.1 |
| UniParc | UPI000056E930 |
| UniProtKB Acc | C3K477 |
| UniProtKB ID | C3K477_PSEFS |
| UniRef100 | UniRef100_Q49P76 |
| UniRef50 | UniRef50_Q49P76 |
| UniRef90 | UniRef90_Q49P76 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative exodeoxyribonuclease III
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.85 |
| Kyte-Doolittle Hydrophobicity Value | -0.445 |
| Molecular Weight (kDa) | 29.9 |
| Isoelectric Point (pI) | 4.87 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 2MYI | RNA BINDING PROTEIN | 01/25/15 | Solution Structure of Crc from P. syringae Lz4W | Pseudomonas sp. Lz4W | NOT | SOLUTION NMR | 98.1 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 507 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004901 (554 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU5989
Search term: putative exodeoxyribonuclease III
|
Human Homologs
References
No references are associated with this feature.