Pseudomonas fluorescens SBW25, PFLU5994 (rpoZ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SBW25 - Assembly GCF_000009225.2
GCF_000009225.2|latest |
| Locus Tag |
PFLU5994
|
| Name |
rpoZ
|
| Replicon | chromosome |
| Genomic location | 6549323 - 6549586 (+ strand) |
Cross-References
| RefSeq | YP_002875478.1 |
| GI | 229593359 |
| EC Number | 2.7.7.6 |
| Entrez | 7816428 |
| INSDC | CAY53525.1 |
| UniParc | UPI00019DB076 |
| UniProtKB Acc | C3K482 |
| UniProtKB ID | RPOZ_PSEFS |
| UniRef100 | UniRef100_C3K482 |
| UniRef50 | UniRef50_Q4K3R3 |
| UniRef90 | UniRef90_Q4K3R3 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DNA-directed RNA polymerase subunit omega
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -10.79 |
| Kyte-Doolittle Hydrophobicity Value | -0.221 |
| Molecular Weight (kDa) | 9.8 |
| Isoelectric Point (pI) | 4.03 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 261 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004906 (553 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU5994
Search term: rpoZ
Search term: DNA-directed RNA polymerase subunit omega
|
Human Homologs
References
No references are associated with this feature.