Pseudomonas fluorescens SBW25, PFLU6002

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU6002
Name
Replicon chromosome
Genomic location 6556448 - 6557368 (+ strand)

Cross-References

RefSeq YP_002875486.1
GI 229593367
Entrez 7816768
INSDC CAY53537.1
UniParc UPI00019DB07E
UniProtKB Acc C3K490
UniProtKB ID C3K490_PSEFS
UniRef100 UniRef100_C3K490
UniRef50 UniRef50_Q4K3Q5
UniRef90 UniRef90_Q4K3Q5

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.24
Kyte-Doolittle Hydrophobicity Value 0.043
Molecular Weight (kDa) 33.5
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 539 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004912 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU6002

Human Homologs

References

No references are associated with this feature.