Pseudomonas fluorescens SBW25, PFLU6002
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SBW25 - Assembly GCF_000009225.2
GCF_000009225.2|latest |
| Locus Tag |
PFLU6002
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 6556448 - 6557368 (+ strand) |
Cross-References
| RefSeq | YP_002875486.1 |
| GI | 229593367 |
| Entrez | 7816768 |
| INSDC | CAY53537.1 |
| UniParc | UPI00019DB07E |
| UniProtKB Acc | C3K490 |
| UniProtKB ID | C3K490_PSEFS |
| UniRef100 | UniRef100_C3K490 |
| UniRef50 | UniRef50_Q4K3Q5 |
| UniRef90 | UniRef90_Q4K3Q5 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
LysR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -1.24 |
| Kyte-Doolittle Hydrophobicity Value | 0.043 |
| Molecular Weight (kDa) | 33.5 |
| Isoelectric Point (pI) | 6.79 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 539 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004912 (552 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU6002
Search term: LysR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.