Pseudomonas fluorescens A506, PflA506_0111 (gcdR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens A506
GCF_000262325.2|latest |
| Locus Tag |
PflA506_0111
|
| Name |
gcdR
|
| Replicon | chromosome |
| Genomic location | 115770 - 116669 (- strand) |
Cross-References
| RefSeq | YP_006321662.1 |
| GI | 387891365 |
| Entrez | 12960449 |
| INSDC | AFJ58283.1 |
| NCBI Locus Tag | PflA506_0111 |
| UniParc | UPI00025E955D |
| UniProtKB Acc | I2BVK0 |
| UniProtKB ID | I2BVK0_PSEFL |
| UniRef100 | UniRef100_I2BVK0 |
| UniRef50 | UniRef50_Q4KKG5 |
| UniRef90 | UniRef90_I2BVK0 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
transcriptional regulator GcdR
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.59 |
| Kyte-Doolittle Hydrophobicity Value | -0.299 |
| Molecular Weight (kDa) | 34.1 |
| Isoelectric Point (pI) | 8.47 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 460 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000439 (1047 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PflA506_0111
Search term: gcdR
Search term: transcriptional regulator GcdR
|
Human Homologs
References
No references are associated with this feature.