Pseudomonas fluorescens A506, PflA506_2719
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens A506 - Assembly GCF_000262325.2
GCF_000262325.2|latest |
| Locus Tag |
PflA506_2719
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3009189 - 3010301 (+ strand) |
Cross-References
| RefSeq | YP_006324196.1 |
| GI | 387893899 |
| Entrez | 12961132 |
| NCBI Locus Tag | PflA506_2719 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
histone deacetylase family protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.57 |
| Kyte-Doolittle Hydrophobicity Value | -0.051 |
| Molecular Weight (kDa) | 39657.7 |
| Isoelectric Point (pI) | 6.23 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 444 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001890 (358 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PflA506_2719
Search term: histone deacetylase family protein
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
E-value:
4.9e-33
Percent Identity:
35.0
|
References
No references are associated with this feature.