Pseudomonas fluorescens A506, PflA506_5300 (tssA1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens A506
GCF_000262325.2|latest
Locus Tag
PflA506_5300
Name
tssA1
Replicon chromosome
Genomic location 5802620 - 5803639 (+ strand)

Cross-References

RefSeq YP_006326686.1
GI 387896389
Entrez 12961799
INSDC AFJ57698.1
NCBI Locus Tag PflA506_5300
UniParc UPI00025E8E61
UniProtKB Acc I2BTW5
UniProtKB ID I2BTW5_PSEFL
UniRef100 UniRef100_I2BTW5
UniRef50 UniRef50_Q4K3N9
UniRef90 UniRef90_I2BTW5

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein TssA1
Synonyms
Evidence for Translation
Charge (pH 7) -20.11
Kyte-Doolittle Hydrophobicity Value -0.322
Molecular Weight (kDa) 36832.7
Isoelectric Point (pI) 4.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 76 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000081 (1212 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PflA506_5300
Search term: tssA1

Human Homologs

References

No references are associated with this feature.