Pseudomonas fluorescens A506, PflA506_5305 (tssF1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens A506
GCF_000262325.2|latest
Locus Tag
PflA506_5305
Name
tssF1
Replicon chromosome
Genomic location 5806928 - 5808787 (+ strand)

Cross-References

RefSeq YP_006326691.1
GI 387896394
Entrez 12961804
INSDC AFJ59264.1
NCBI Locus Tag PflA506_5305
UniParc UPI00025E8E66
UniProtKB Acc I2BYD1
UniProtKB ID I2BYD1_PSEFL
UniRef100 UniRef100_I2BYD1
UniRef50 UniRef50_Q4K3N4
UniRef90 UniRef90_Q4K3N4

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein TssF1
Synonyms
Evidence for Translation
Charge (pH 7) 2.39
Kyte-Doolittle Hydrophobicity Value -0.269
Molecular Weight (kDa) 69.2
Isoelectric Point (pI) 7.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 104 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000087 (1252 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PflA506_5305
Search term: tssF1

Human Homologs

References

No references are associated with this feature.