Pseudomonas putida F1, Pput_0089

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida F1
GCF_000016865.1|latest
Locus Tag
Pput_0089
Name
Replicon chromosome
Genomic location 94857 - 95768 (+ strand)

Cross-References

RefSeq YP_001265448.1
GI 148545346
Entrez 5193295
INSDC ABQ76264.1
NCBI Locus Tag Pput_0089
UniParc UPI00005FD1D1
UniProtKB Acc A5VWK4
UniProtKB ID HEM6_PSEP1
UniRef100 UniRef100_A5VWK4
UniRef50 UniRef50_P84155
UniRef90 UniRef90_Q88RQ6

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen III oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -6.98
Kyte-Doolittle Hydrophobicity Value -0.481
Molecular Weight (kDa) 34.4
Isoelectric Point (pI) 5.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 277 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000024 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pput_0089

Human Homologs

Ensembl 97, assembly GRCh38.p12
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value: 3.1e-77
Percent Identity: 47.7

References

No references are associated with this feature.